BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011C09SP1|AL426187
(746 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig667 1286 0.0
>3x_Contig667
Length = 2077
Score = 1286 bits (648), Expect = 0.0
Identities = 662/664 (99%), Gaps = 2/664 (0%)
Strand = Plus / Plus
Query: 1 gatctagagtttctataatattggtatgcttcaaagatgaagagatgcagaattcagacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1415 gatctagagtttctataatattggtatgcttcaaagatgaagagatgcagaattcagacg 1474
Query: 61 tcaacctcttcgaatatttcaccggattttcagtgggtcttcttctaaattctttaacag 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1475 tcaac-tcttcgaatatttcaccggattttcagtgggtcttcttctaaattctttaacag 1533
Query: 121 catataaaatttctccactaacgctttttaagttcttcttgtgacaaatccgtaccacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1534 catataaaatttctccactaacgctttttaagttcttcttgtgacaaatccgtaccacac 1593
Query: 181 cgaag-aacctttcccgataacttcctggcatctcccatatttctgcccaaaggtaacag 239
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1594 cgaaggaacctttcccgataacttcctggcatctcccatatttctgcccaaaggtaacag 1653
Query: 240 acccatgatgcaatgggttgacagcgtcttcaaaattaagcatttttaagtctggttggc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1654 acccatgatgcaatgggttgacagcgtcttcaaaattaagcatttttaagtctggttggc 1713
Query: 300 tttgctcttgttttgtccccagcacttgtgtagccccactataaggataagcagtcccat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1714 tttgctcttgttttgtccccagcacttgtgtagccccactataaggataagcagtcccat 1773
Query: 360 tttgaagttgataagtctcggcagaagcggcgtccacttgctttatgagacctgcaaata 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1774 tttgaagttgataagtctcggcagaagcggcgtccacttgctttatgagacctgcaaata 1833
Query: 420 atgatggtggatcaccggatttcattgactttatgagtatatccggtacagcagatttgg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1834 atgatggtggatcaccggatttcattgactttatgagtatatccggtacagcagatttgg 1893
Query: 480 cttcaccacgtaatttttgtgcaccaagcatatttttaatcatagatcccaacttctcct 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1894 cttcaccacgtaatttttgtgcaccaagcatatttttaatcatagatcccaacttctcct 1953
Query: 540 gtctctttgcatttttcaaatggtgttcatgggtcccatcctcgtgcaggatgaacctac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1954 gtctctttgcatttttcaaatggtgttcatgggtcccatcctcgtgcaggatgaacctac 2013
Query: 600 ggtttggattaggacacgtatttgcagaggatagagtcgataagtttgccgttgatgatg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2014 ggtttggattaggacacgtatttgcagaggatagagtcgataagtttgccgttgatgatg 2073
Query: 660 caga 663
||||
Sbjct: 2074 caga 2077
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5507
Number of Sequences: 1807
Number of extensions: 5507
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 746
length of database: 10,358,551
effective HSP length: 16
effective length of query: 730
effective length of database: 10,329,639
effective search space: 7540636470
effective search space used: 7540636470
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)